Condensed Matrix Descriptor for Protein Sequence Comparison
نویسندگان
چکیده
منابع مشابه
Filtering Bio-sequence Based on Sequence Descriptor
Study on biological sequence database similarity searching has received substantial attention in the past decade, especially after the sequencing of the human genome. As a result, with larger and larger increases in database sizes, fast similarity search is becoming an important issue. Transforming sequences into numerical vectors, called sequence descriptors, for storing in a multidimensional ...
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We develop a novel position-feature-based model for protein sequences by employing physicochemical properties of 20 amino acids and the measure of graph energy. The method puts the emphasis on sequence order information and describes local dynamic distributions of sequences, from which one can get a characteristic B-vector. Afterwards, we apply the relative entropy to the sequences representing...
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ژورنال
عنوان ژورنال: International Journal of Analytical Mass Spectrometry and Chromatography
سال: 2016
ISSN: 2332-1768,2332-1776
DOI: 10.4236/ijamsc.2016.41001